Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
|---|---|---|---|---|---|---|---|---|---|
| KIRP | rs11860025 | chr16:20439568 | A/G | 0.000197 | 214 | 15.88 | 17 | 1.73 | KM Plot |
| KIRP | rs11860113 | chr16:20439651 | G/A | 0.000356 | 213 | 15.88 | 16.72 | 1.73 | KM Plot |
| KIRP | rs11860828 | chr16:47729322 | T/C | 7.92E-8 | 213 | 17.2 | 13.17 | 10.83 | KM Plot |
| KIRP | rs11862096 | chr16:47569732 | C/T | 7.93E-8 | 214 | 17.6 | 12.32 | 12.85 | KM Plot |
| KIRP | rs11862204 | chr16:4519586 | G/A | 3.38E-6 | 214 | 16.45 | 12.63 | 10.83 | KM Plot |
| KIRP | rs11862245 | chr16:4519741 | G/A | 3.38E-6 | 214 | 16.45 | 12.63 | 10.83 | KM Plot |
| KIRP | rs11862281 | chr16:47660034 | T/C | 7.92E-8 | 212 | 17.6 | 12.9 | 12.85 | KM Plot |
| KIRP | rs11862489 | chr16:4519742 | C/T | 3.38E-6 | 214 | 16.45 | 12.63 | 10.83 | KM Plot |
| KIRP | rs11863671 | chr16:4528636 | T/C | 3.38E-6 | 214 | 16.45 | 12.63 | 10.83 | KM Plot |
| KIRP | rs11863736 | chr16:19835117 | G/T | 4.63E-5 | 210 | 14.87 | 18.47 | 15.52 | KM Plot |
| KIRP | rs11864097 | chr16:19853189 | C/T | 2.78E-5 | 213 | 14.83 | 18.12 | 15.58 | KM Plot |
| KIRP | rs11865189 | chr16:19854259 | A/T | 0.000455 | 212 | 15.33 | 16.43 | 18.23 | KM Plot |
| KIRP | rs11865416 | chr16:19854655 | G/A | 5.81E-5 | 213 | 15.08 | 16.93 | 15.58 | KM Plot |
| KIRP | rs11865578 | chr16:19871982 | G/A | 1.17E-9 | 206 | 15.07 | 17.7 | 11.43 | KM Plot |
| KIRP | rs11866391 | chr16:19846324 | T/C | 2.49E-6 | 205 | 14.47 | 19.5 | 12.23 | KM Plot |